QIAGEN CLC Genomics

QIAGEN CLC Genomics is a bioinformatics software designed to reduce your data analysis bottlenecks. With desktop, server and cloud solutions, CLC offers flexibility for any size organization.
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Focus on discovery, not data processing

Gain clearer insights into your sequencing, NGS or ‘omics data with our comprehensive software for genomics, transcriptomics and epigenomics analyses.

With this easy-to-use, ISO 9001 certified bioinformatics software, you can develop workflows and visualizations for any sequence analysis.

NGS analysis for any species, platform or workflow

Our workbenches offer integrated workflows, robust analysis tools and a programming-free GUI.

Platform-independent

Designed to analyze data from all common sequencing platforms, library preparation protocols and panels. Runs on any operating system.

Template workflows

Prebuilt workflow templates for accelerated analysis of your sequencing data, with options to customize your own.

Enterprise-ready

Intuitive high-throughput analysis and automation for any number of user.

Which workbench is right for you?

Our workbenches offer integrated workflows, robust tools and a GUI that requires no programming skills.

QIAGEN CLC Main Workbench

A solution designed to support your day-to-day laboratory needs

DNA, RNA and protein sequence analysis
Whole genome and multiple sequence alignment
Primer design
Phylogenic analysis
Sanger sequencing analysis and multilocus sequence typing
Molecular cloning, including Gibson cloning
Microarray expression analysis
3D protein molecule view
Learn more

QIAGEN CLC Genomics Workbench Premium

A scalable solution designed for NGS data, including biomedical, microbial, metagenomics, single cell and more

Short and long read analyses, including de novo read assembly, RNA-seq, read mapping and variant detection
Biomedical genomics analyses, including immune repertoire, TMB, MSI and HRD scoring
Single-cell analysis
Microbial typing and AMR
Genome finishing  
Microbiome analysis
ChIPseq and DNA methylation analysis
Learn more

Which workbench is right for you?

QIAGEN CLC Main Workbench

A solution that supports your day-to-day laboratory needs

QIAGEN CLC Genomics Workbench Premium

A scalable NGS solution that also includes all the features of CLC Main Workbench

Primer design
Phylogenic analysis
DNA, RNA and protein sequence analysis
Whole genome and multiple sequence alignment
Sanger sequencing analysis and multilocus sequence typing
Molecular cloning, including Gibson cloning
Microarray expression analysis
3D protein molecule view
Short and long read analyses, including de novo read assembly, variant detection and read mapping
Biomedical genomics analyses, including immune repertoire, TMB, MSI and HRD scoring
RNA-seq analysis
Single-cell analysis
Genome finishing
Microbiome analysis
ChIPseq and DNA methylation analysis
Microbial typing and antimicrobial resistance
Adaptable NGS solutions for teams of any size
Scale your high-throughput analysis and automation with our enterprise solutions

QIAGEN CLC Genomics Server

Deliver high-throughput sequencing analysis to any number of users. Build and manage a modern bioinformatics analysis environment that is suitable for GMP environments of any size.

QIAGEN CLC Cloud Module

Make bioinformatics analysis accessible to anyone. Build your workflows in our Premium Workbench and deploy them on Amazon Web Services (AWS) in minutes, and easily access the cloud from any Workbench.

Still haven’t found what you want?

Customize your CLC Workbench with modules and plugins. These extensions provide tools and workflows for your specific analysis needs.

Build your complete analysis workflow

Our bioinformatics specialists are ready to help you take control of your data processing and discovery.
Request a consultation
Scale your data analyses
Are you struggling through mountains of expression data? Learn more about our ecosystem of solutions.
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Not convinced a workbench will work for you?
See why you should take control of your bioinformatics analysis workflows.
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Easy immune repertoire analysis
See how your clinical lab can quickly incorporate workflows to learn more about immune system function.
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Sample to Insight
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